{"id":131,"date":"2021-11-05T13:04:04","date_gmt":"2021-11-05T12:04:04","guid":{"rendered":"https:\/\/docenciamicrobiologia.umh.es\/?page_id=131"},"modified":"2023-02-05T00:22:47","modified_gmt":"2023-02-04T23:22:47","slug":"7-identificacion-por-biologia-molecular","status":"publish","type":"page","link":"https:\/\/docenciamicrobiologia.umh.es\/en\/indice-de-practicas\/7-identificacion-por-biologia-molecular\/","title":{"rendered":"7. Identification through Molecular Biology"},"content":{"rendered":"<p><strong>Content:<\/strong> Extraction of nucleic acids of fungal and bacterial cells. Amplification of the microbial DNA barcoding regions through the polymerase chain reaction (PCR). Detection of specific amplicons through electrophoresis in agarose gel. Sequencing and comparing sequences in the databases to identify genus and species.<\/p>\n<p><strong>Overview:<\/strong> The molecular diagnosis is mainly based on two major cornerstones: nucleic acid hybridization and the amplification methods of these.<\/p>\n<p><strong>Specific objectives:<\/strong><\/p>\n<p>&#8211; Use a commercial system to lyse fungal and bacterial cells and extract the deoxyribonucleic acid (DNA) of both.<\/p>\n<p>&#8211; Use the polymerase chain reaction technique (PCR) to amplify regions of the DNA that contain identifying sequences of the species.<\/p>\n<p>&#8211; Compare the sequences obtained with those contained in the databases to try and get a higher coefficient of coincidence, to identify the species.<\/p>\n<p><strong>Carrying out the practical:<\/strong><\/p>\n<p>Each lab bench has yeast (practical 6) and bacteria to be tested (practical 8). The even number lab benches will use the yeast and the odd number lab benches will use the corresponding bacteria.<\/p>\n<div style=\"text-align: center\">\n<table style=\"border: hidden;margin: 0 auto\">\n<tbody>\n<tr style=\"border: hidden\">\n<td style=\"border: hidden;text-align: center\"><img loading=\"lazy\" style=\"margin: 5px\" src=\"https:\/\/docenciamicrobiologia.umh.es\/files\/2021\/11\/placa-bacteiana.png\" alt=\"\" width=\"250\" height=\"240\" \/><\/td>\n<td><img loading=\"lazy\" class=\"aligncenter\" src=\"https:\/\/docenciamicrobiologia.umh.es\/files\/2021\/11\/e.coli-dna.png\" alt=\"\" width=\"250\" height=\"240\" \/><\/td>\n<td><img loading=\"lazy\" class=\"aligncenter\" src=\"https:\/\/docenciamicrobiologia.umh.es\/files\/2021\/11\/pcr.png\" alt=\"\" width=\"250\" height=\"240\" \/><\/td>\n<\/tr>\n<tr style=\"border: hidden\">\n<td style=\"text-align: center;border: hidden;font-size: 12px\">Microorganisms: Bacteria, Fungi, Virus, \u2026.<\/td>\n<td style=\"text-align: center;border: hidden;font-size: 12px\"><a href=\"https:\/\/docenciamicrobiologia.umh.es\/en\/indice-de-practicas\/7-identificacion-por-biologia-molecular\/extraccion-de-adn\/\" target=\"_blank\" rel=\"noopener noreferrer\">Extract genetic material: DNA or RNA<\/a><\/td>\n<td style=\"text-align: center;border: hidden;font-size: 12px\"><a href=\"https:\/\/docenciamicrobiologia.umh.es\/en\/indice-de-practicas\/7-identificacion-por-biologia-molecular\/amplificacion-de-secuencias-barcode\/\" target=\"_blank\" rel=\"noopener noreferrer\">Amplification of the DNA through a PCR<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/div>\n<p>&nbsp;<\/p>\n<div style=\"text-align: center\">\n<table style=\"border: hidden;margin: 0 auto\">\n<tbody>\n<tr style=\"border: hidden\">\n<td style=\"border: hidden;text-align: center\"><img loading=\"lazy\" src=\"https:\/\/docenciamicrobiologia.umh.es\/files\/2021\/11\/gel.jpg\" alt=\"\" width=\"250\" height=\"240\" \/><\/td>\n<td><img loading=\"lazy\" class=\"aligncenter\" src=\"https:\/\/docenciamicrobiologia.umh.es\/files\/2021\/11\/cromatograma.png\" alt=\"\" width=\"250\" height=\"240\" \/><\/td>\n<td><img loading=\"lazy\" class=\"aligncenter\" src=\"https:\/\/docenciamicrobiologia.umh.es\/files\/2021\/11\/base-de-datos.png\" alt=\"\" width=\"250\" height=\"240\" \/><\/td>\n<\/tr>\n<tr style=\"border: hidden\">\n<td style=\"text-align: center;border: hidden;font-size: 12px\"><a href=\"https:\/\/docenciamicrobiologia.umh.es\/indice-de-practicas\/7-identificacion-por-biologia-molecular\/visualizacion-en-gel-de-agarosa\/\" target=\"_blank\" rel=\"noopener noreferrer\">Visualization in agarose gel<\/a><\/td>\n<td style=\"text-align: center;border: hidden;font-size: 12px\"><a href=\"https:\/\/docenciamicrobiologia.umh.es\/indice-de-practicas\/7-identificacion-por-biologia-molecular\/secuenciacion-del-amplicon\/\">Sequencing of the amplicon<\/a><\/td>\n<td style=\"text-align: center;border: hidden;font-size: 12px\"><a href=\"https:\/\/docenciamicrobiologia.umh.es\/indice-de-practicas\/7-identificacion-por-biologia-molecular\/analisis-de-secuencias\/\">Comparison of sequences with the databases<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/div>\n<p><span style=\"font-size: 14px\"> Apoyo a acciones de Innovaci\u00f3n Docente &#8211; Vicerrectorado de Estudios \/ Consultas e incidencias t\u00e9cnicas- Tlf: 96 522 2059 &#8211; <a href=\"mailto:info@goumh.es\" target=\"_blank\" rel=\"noopener\">info@goumh.es <\/a><\/span><\/p>","protected":false},"excerpt":{"rendered":"<p>Content: Extraction of nucleic acids of fungal and bacterial cells. Amplification of the microbial DNA barcoding regions through the polymerase chain reaction (PCR). Detection of specific amplicons through electrophoresis in agarose gel. Sequencing and comparing sequences in the databases to identify genus and species.<br \/>\nOverview: The molecular diagnosis is mainly based on two major cornerstones: nucleic [&#8230;]<\/p>\n","protected":false},"author":3782,"featured_media":0,"parent":36,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"ngg_post_thumbnail":0,"_links_to":"","_links_to_target":""},"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v17.5 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/docenciamicrobiologia.umh.es\/en\/indice-de-practicas\/7-identificacion-por-biologia-molecular\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"7. Identification through Molecular Biology - MicroWeb UMH\" \/>\n<meta property=\"og:description\" content=\"Content: Extraction of nucleic acids of fungal and bacterial cells. Amplification of the microbial DNA barcoding regions through the polymerase chain reaction (PCR). Detection of specific amplicons through electrophoresis in agarose gel. Sequencing and comparing sequences in the databases to identify genus and species. 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